Information for 7-CAGCCAACCC (Motif 17)

G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
Reverse Opposite:
C T A G A C T G A C T G A G C T G C A T A C T G A T C G G A T C A G C T C T A G
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.815
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif328.6
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets65.1 +/- 23.5bp
Average Position of motif in Background51.6 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGCCAACCC
-TGCCAA---
 G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAACCC
BCAGACWA---
 A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAACCC
CGTGCCAAG--
 A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGCCAACCC---
ACTATGCCAACCTACC
 A C G T A C G T A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAACCC----
SCAGYCADGCATGAC
 A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGCCAACCC
ATGCCAACC-
 G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAACCC
ACTAGCCAATCA
 A C G T A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAACCC------
NNNTCCATCCCATAANN
 A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCCAACCC
CAGCC-----
 G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAACCC-----
ATCCCCGCCCCTAAAA
 A C G T G A T C T C G A C T A G A T G C G T A C C G T A T C G A T G A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A