Information for 2-GGGACGCTTTGTTCCT (Motif 4)

C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
Reverse Opposite:
C T G A C T A G C A T G T C G A C G T A A T G C C G T A C G T A G T C A A T C G A G T C A T C G A G C T A T G C G T A C A G T C
p-value:1e-17
log p-value:-3.983e+01
Information Content per bp:1.680
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.9 +/- 18.6bp
Average Position of motif in Background59.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
-----YCTTTGTTCC-
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
AGGVNCCTTTGT----
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
-----CCWTTGTYYB-
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
-----CCATTGTTNY-
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
-----CCTTTGTTTT-
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
------CTTTGT----
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGCTTTGTTCCT
NGGTACACNGTGTTCCC
 A C G T C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGACGCTTTGTTCCT--
-TNNTCCTTTGTTCTNNT
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

NR3C2/MA0727.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGCTTTGTTCCT
GGGAACATTGTGTTCCC
 A C G T C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGACGCTTTGTTCCT
AGNACAGNCTGTTCTN
 C T A G A C T G A T C G C T G A T A G C T C A G A T G C C A G T A C G T A C G T A T C G C G A T A C G T G T A C A G T C A G C T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T