Information for 14-WRGCAGGCCAGAG (Motif 18)

C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G
Reverse Opposite:
A T G C G A C T A G T C A C G T A C T G T A C G A G T C G T A C A C G T A T C G A G T C A G C T G C T A
p-value:1e-10
log p-value:-2.349e+01
Information Content per bp:1.827
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets59.6 +/- 31.6bp
Average Position of motif in Background41.0 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WRGCAGGCCAGAG----
---CAGGCCNNGGCCNN
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WRGCAGGCCAGAG-
----ATGCCAGACN
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:WRGCAGGCCAGAG-
---AAGGCAAGTGT
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WRGCAGGCCAGAG----
---TAGGGCAAAGGTCA
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:WRGCAGGCCAGAG----
--GTAGGGCAAAGGTCA
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WRGCAGGCCAGAG----
--AGGGGTCAGAGGTCA
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:WRGCAGGCCAGAG----
---GAGGTCAAAGGTCA
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:WRGCAGGCCAGAG
TBGCACGCAA---
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:WRGCAGGCCAGAG
WDNCTGGGCA---
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:WRGCAGGCCAGAG
----AGGCCTNG-
 C G A T C T G A C T A G A T G C C G T A A C T G A C T G A T G C G T A C C G T A A C T G C T G A A T C G
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T