Information for 6-TTCACACAAT (Motif 7)

C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
Reverse Opposite:
C G T A A G C T A C G T C T A G A C G T A T C G A C G T A C T G C T G A C G T A
p-value:1e-12
log p-value:-2.938e+01
Information Content per bp:1.778
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif280.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets45.1 +/- 27.8bp
Average Position of motif in Background50.5 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTCACACAAT
TTMACACCTT
 C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCACACAAT
TTCACACCTT
 C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTCACACAAT---
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTCACACAAT
NTTTTCACACCTT
 A C G T A C G T A C G T C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCACACAAT
ATCACCCCAT
 C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAAT
CTTCACACCTA
 A C G T C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAAT
TTTCACACCTN
 A C G T C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTCACACAAT-----
CTCACACAATGGCGC
 C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTCACACAAT
ATCACCCCAT
 C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAAT
TTTCACACCT-
 A C G T C G A T A G C T T G A C G T C A A T G C G T C A A G T C G T C A T C G A A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T