Information for 3-TGACCTTTGG (Motif 3)

C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G
Reverse Opposite:
T G A C G A T C C G T A T C G A C T G A C A T G C A T G A G C T A T G C G T C A
p-value:1e-48
log p-value:-1.107e+02
Information Content per bp:1.660
Number of Target Sequences with motif147.0
Percentage of Target Sequences with motif18.31%
Number of Background Sequences with motif2082.2
Percentage of Background Sequences with motif4.36%
Average Position of motif in Targets52.1 +/- 24.8bp
Average Position of motif in Background50.7 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTGG
CTGACCTTTG-
 A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTTGG--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.92
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTTGG--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TGACCTTTGG--
TGACCTTTNCNT
 C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TGACCTTTGG
CNNTTGACCTTTG-
 A C G T A C G T A C G T A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGG-----
TGGACTTTGNNCTCN
 C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TGACCTTTGG
NTGACCTTGA-
 A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTGG
GTGACCTT---
 A C G T C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGG----
TGACCTTTGACCTN
 C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGG----
TGACCTTTGCCCTA
 C A G T T A C G T C G A G T A C G T A C G A C T A G C T G C A T C T A G A C T G A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A