Information for 9-AGAGARYWTRTGA (Motif 13)

C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C G T C A A G C T C G T A C G T A C T A G A G T C A C G T A G T C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.285e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 20.9bp
Average Position of motif in Background55.8 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGAGARYWTRTGA
TTGACCGAGAATTCC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AGAGARYWTRTGA-
----AACATATGTT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGAGARYWTRTGA-
----ANCATATGGT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGAGARYWTRTGA--
---AAACATATGTTT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGAGARYWTRTGA-
----RTCATGTGAC
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGAGARYWTRTGA----
CATTGACCTTTTGACCTC
 A C G T C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGAGARYWTRTGA-
----AACATATGTT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:AGAGARYWTRTGA-----
--NAATTTTACGAGNTNN
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGAGARYWTRTGA----
-TTGACCTTTTGACCTT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGAGARYWTRTGA-
----ACCATATGGT
 C G T A A C T G C G T A C T A G C G T A C T A G A G T C C G A T A C G T C T G A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T