Information for 7-TTGMCAASWCMTT (Motif 10)

A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G A T A T G C A C G T A C G T A C T G A C T G A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.698e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.5 +/- 22.6bp
Average Position of motif in Background88.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGMCAASWCMTT
TTGCCAAG-----
 A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTGMCAASWCMTT
GGTGCCAAGT----
 A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTGMCAASWCMTT
CGTGCCAAG-----
 A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGMCAASWCMTT
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGMCAASWCMTT
-TGCCAA------
 A C G T A C G T A C T G T G A C A G T C C G T A C G T A A T C G C G T A A G T C G T C A A C G T A C G T
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T