Information for 14-CTGCTATTGG (Motif 42)

A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.424e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 32.1bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTGG--
--CCGATTGGCT
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTGG----
TNNTGCTACTGTNNNN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTGG-----
---TGATTGGCTANN
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGCTATTGG--
---CCATTGTTC
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTGG----
CNNNGCTACTGTANNN
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

SOX4/MA0867.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTATTGG--
AACACTGCAATTGTTC
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGCTATTGG--
------TTGGCA
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGCTATTGG
NTTTTATTGG
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTATTGG---
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTATTGG-
AACAATGNTATTGTT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T