Information for 22-ATAARATGMAATC (Motif 37)

C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
Reverse Opposite:
C T A G G T C A C G A T C G A T A C G T T G A C C T G A G A C T A G C T C G A T C G A T C T G A A C G T
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.682
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif80.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets57.6 +/- 25.6bp
Average Position of motif in Background41.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATAARATGMAATC
TAGGTAATAAAATTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATAARATGMAATC
AATGCAATAAAATTTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ATAARATGMAATC
ACGGCCATAAAATTAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATAARATGMAATC--
---AGATGCAATCCC
 C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ATAARATGMAATC
CTACCAATAAAATTCT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATAARATGMAATC
--ATGATGCAAT-
 C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATAARATGMAATC
--MTGATGCAAT-
 C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATAARATGMAATC
CCAATAAAAA------
 A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATAARATGMAATC
GTCATAAAAN------
 A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATAARATGMAATC
AGAGCCATAAAATTCG---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G T A C T A G C T G A G A C T A C T G T G C A C G T A C G T A C A G T A G T C
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T A C G T