Information for 7-GGCAGSVSKCACT (Motif 7)

C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T A T C G G T C A A T C G A C T G A T C G A G T C C G A T A C T G A G T C A G T C
p-value:1e-14
log p-value:-3.356e+01
Information Content per bp:1.748
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif49.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets45.1 +/- 26.1bp
Average Position of motif in Background52.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCAGSVSKCACT-------
GGYAGCAYDTGCTDCCCNNN
 C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGSVSKCACT
TNNGGGCAG--------
 A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCAGSVSKCACT
NGAAGC-------
 C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGCAGSVSKCACT---
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCAGSVSKCACT
NGATGACGTCAT-
 C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGCAGSVSKCACT
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GGCAGSVSKCACT
NAGANTGGCGGGGNGNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCAGSVSKCACT
TGACAGGTGTCA--
 A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCAGSVSKCACT
TGACAGCTGTCA--
 A C G T C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGCAGSVSKCACT
GGGAGGACNG---
 C T A G A C T G G T A C C G T A A C T G T A G C T G A C A T G C A C G T A T G C C G T A A T G C A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T