Information for 6-CAGAAACACMAAGAGS (Motif 5)

A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
Reverse Opposite:
T A C G A G T C A C G T A G T C C G A T C G A T C A G T A T C G A C G T A C T G A C G T A G C T A C G T A G T C A C G T A T C G
p-value:1e-13
log p-value:-3.142e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.7 +/- 16.3bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS
--GAAAGTGAAAGT--
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS
AACAAACAACAAGAG-
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGAAACACMAAGAGS
--GAAACTGAAACT--
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGAAACACMAAGAGS
CCAGGAACAG-------
 A C G T A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS
--GAAASYGAAASY--
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CAGAAACACMAAGAGS
WWATRTAAACAN-------
 A C G T A C G T A C G T A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS
-GTAAACA--------
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGAAACACMAAGAGS
AAATAAACA--------
 A C G T A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS
GCAAAACATTACTA--
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGAAACACMAAGAGS-
-AAACAGACAAAGGAAT
 A T G C C G T A A C T G C G T A C T G A C G T A A G T C C G T A A T G C G T A C C G T A C G T A A C T G C G T A A C T G A T C G A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T