Information for 3-CCCNTGGGAC (Motif 3)

A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C
Reverse Opposite:
A T C G A G C T A G T C A G T C A G T C G T C A C G T A C T A G C T A G A C T G
p-value:1e-21
log p-value:-5.032e+01
Information Content per bp:1.697
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif19.36%
Number of Background Sequences with motif3788.9
Percentage of Background Sequences with motif8.10%
Average Position of motif in Targets46.0 +/- 25.9bp
Average Position of motif in Background50.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CCCNTGGGAC-
TCCCNNGGGACN
 A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---CCCNTGGGAC-
ATTCCCAAGGGAAT
 A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCCNTGGGAC
GTCCCCAGGGGA-
 A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCCNTGGGAC-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCCNTGGGAC-
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CCCNTGGGAC-
CACCCCCGGGGGGG
 A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCNTGGGAC--
--CSTGGGAAAD
 A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCCNTGGGAC--
CCCCCCCGGGGGGGT
 A C G T A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CCCNTGGGAC
---TGGGGA-
 A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCNTGGGAC
TGCCCNGGGGCA
 A C G T A C G T A G T C A G T C A G T C G C A T C A G T A C T G C T A G A C T G C T G A T A G C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A