Information for 7-CCAGGCTTCA (Motif 21)

T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
Reverse Opposite:
G A C T A T C G C G T A C G T A T C A G A T G C A T G C C G A T A C T G A C T G
p-value:1e-9
log p-value:-2.075e+01
Information Content per bp:1.836
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif196.0
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets45.2 +/- 28.8bp
Average Position of motif in Background53.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CCAGGCTTCA
----GCTTCC
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCAGGCTTCA
-CAAGCTT--
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCAGGCTTCA
CNAGGCCT--
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCAGGCTTCA--
--TGGTTTCAGT
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGGCTTCA
CTAGGCCT--
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGCTTCA--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGCTTCA
TGCCCAGNHW---
 A C G T A C G T A C G T T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCAGGCTTCA
BCAGACWA--
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCTTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCAGGCTTCA-------
TCACCCATCAATAAACA
 T G A C G T A C C G T A T A C G A T C G A G T C C G A T A C G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A