Information for 6-KGTSCCTCACAGCACA (Motif 9)

A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A
Reverse Opposite:
A C G T A C T G A C G T A C T G A G T C C G A T T A C G A C G T T A C G G T C A C A T G A C T G A T C G T G C A A T G C T G A C
p-value:1e-13
log p-value:-3.065e+01
Information Content per bp:1.717
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 30.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:KGTSCCTCACAGCACA
-------CACAGN---
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA---
----CCACACAGCAGGAGA
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA-------
-------CGAAGCACACAAAATA
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KGTSCCTCACAGCACA
GGTCCCGCCC------
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA---
----CCACACAGCAGGAGA
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:KGTSCCTCACAGCACA
----SCTGTCARCACC
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA
---------CAGCC--
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA---
----CCGCATAGCAACGGA
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:KGTSCCTCACAGCACA-
-------NACAGGAAAT
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:KGTSCCTCACAGCACA-------
TGTGACCCTTAGCAACCGATTAA
 A C T G T A C G A C G T A T G C T G A C G A T C C A G T A G T C T C G A A T G C C G T A C T A G T G A C C G T A G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A