Information for 19-MACATGCCAG (Motif 25)

T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
Reverse Opposite:
A T G C A C G T C T A G A C T G A G T C G T C A C G A T A T C G A C G T A C G T
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.758
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif593.1
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets44.0 +/- 28.0bp
Average Position of motif in Background48.8 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:MACATGCCAG-
--CGTGCCAAG
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:MACATGCCAG
----TGCCAA
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-MACATGCCAG
NNACTTGCCTT
 A C G T T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:MACATGCCAG--
---ATGCCAACC
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:MACATGCCAG---
---ATGCCAGACN
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---MACATGCCAG
TGGCACGTGCCA-
 A C G T A C G T A C G T T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:MACATGCCAG--
--GGTGCCAAGT
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:MACATGCCAG
--CTTGGCAA
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---MACATGCCAG
CGGCACGTGCCA-
 A C G T A C G T A C G T T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:MACATGCCAG
-ACATTCCA-
 T G C A G T C A A T G C C G T A C A G T A C T G A G T C A G T C C G T A T A C G
A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T