Information for 12-GCAAAGATCTTTG (Motif 18)

T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
Reverse Opposite:
T G A C G T C A C T G A C G T A T C A G T C G A G A C T G A T C G C A T A C G T C A G T A C T G A T G C
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.646
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif250.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets57.7 +/- 26.0bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAAAGATCTTTG-
--AGGVNCCTTTGT
 T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G A C G T
A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGATCTTTG
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAGATCTTTG
ANGNAAAGGTCA---
 A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGATCTTTG
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAGATCTTTG
TGGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGATCTTTG
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GCAAAGATCTTTG----
-------YCTTTGTTCC
 T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAAAGATCTTTG-------
---TNNTCCTTTGTTCTNNT
 T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCAAAGATCTTTG----
-------CCTTTGATGT
 T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGATCTTTG
GTAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T T A C G T G A C G C T A T C G A C G T A C T A G C T G A A G C T A G T C C G A T G A C T A C G T A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T