Information for 9-GGGAAAGCCRCTG (Motif 11)

A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
Reverse Opposite:
A G T C G T C A A C T G G A C T A C T G T A C G A G T C C G A T A C G T A G C T A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.660e+01
Information Content per bp:1.856
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.2 +/- 25.3bp
Average Position of motif in Background59.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGAAAGCCRCTG
GGGAAATCCCCN-
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCCRCTG
-GGAAATCCCC--
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGAAAGCCRCTG
AGGGGATTCCCCT-
 A C G T A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCCRCTG
-GGAAANCCCC--
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGAAAGCCRCTG
-GGAAATTCCC--
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAAGCCRCTG
AGGGGATTCCCCT-
 A C G T A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGAAAGCCRCTG
GGGGGAATCCCC--
 A C G T A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAAGCCRCTG
CSTGGGAAAD------
 A C G T A C G T A C G T A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGAAAGCCRCTG
-GGAAATTCCC--
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGAAAGCCRCTG-------
---AATCGCACTGCATTCCG
 A C T G A C T G A C T G C T G A C G T A C G T A C T A G A T G C A G T C C T G A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G