Information for 10-GCCTGCAGSTCCTGGT (Motif 17)

A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
Reverse Opposite:
C G T A A G T C A G T C C G T A C T A G A C T G C G T A A T C G A G T C A C G T A C T G A G T C C G T A A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 23.5bp
Average Position of motif in Background18.1 +/- 5.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAGSTCCTGGT
TGCCTGCGYCMCCTT--
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCCTGCAGSTCCTGGT
--SDGCAGGTGCNS--
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAGSTCCTGGT
TGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GCCTGCAGSTCCTGGT
------ACATCCTGNT
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCTGCAGSTCCTGGT
-CCTGCTGAGH-----
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAGSTCCTGGT
NGCCTGAGGCN------
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAGSTCCTGGT
NGCCTNAGGCN------
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCCTGCAGSTCCTGGT
---AGCAGCTGCT---
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCCTGCAGSTCCTGGT
----NCAGCTGCTG--
 A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGCAGSTCCTGGT
NNNNAGCAGCTGCTGAN
 A C G T A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A T C G A C G T A G T C A G T C C G A T A C T G A C T G G A C T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G