Information for 1-GACCTYTGCCCYAGWT (Motif 1)

C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
Reverse Opposite:
G T C A C G A T T A G C G A C T C T G A C A T G C T A G A T C G T G A C C G T A C T G A C T G A C T A G C A T G A C G T G A T C
p-value:1e-61
log p-value:-1.427e+02
Information Content per bp:1.579
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif10.80%
Number of Background Sequences with motif501.9
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets49.8 +/- 23.0bp
Average Position of motif in Background50.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGCCCTAN--
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGCCCCA---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGCCCTA---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTCTGACCCCN--
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGACCTN---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGACCTC---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGACCCC---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGACCCC---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGACCTTTGACCCC---
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GACCTYTGCCCYAGWT
TGGACTTTGNNCTCN--
 A C G T C T A G G T C A G T A C A G T C G A C T A G C T A C G T A C T G T A G C G A T C G T A C G A C T C T G A A T C G G C T A C A G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T