Information for 6-TCTTGGCAMC (Motif 7)

C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
Reverse Opposite:
C A T G A C G T C G A T A T C G A G T C A G T C T C G A C T G A T C A G G C T A
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.587
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.99%
Number of Background Sequences with motif1704.5
Percentage of Background Sequences with motif3.53%
Average Position of motif in Targets45.4 +/- 27.1bp
Average Position of motif in Background49.9 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCAMC
-CTTGGCAA-
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TCTTGGCAMC
NNTTGGCANN
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TCTTGGCAMC
-NTTGGCANN
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:TCTTGGCAMC
--TTGGCA--
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TCTTGGCAMC
GGTTGGCAT-
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCTTGGCAMC
ARNTGACA--
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCTTGGCAMC
TNNGGGCAG-
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCTTGGCAMC
--YTGWCADY
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCTTGGCAMC
--TTGACAGG
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCTTGGCAMC
--TTGACAG-
 C G A T A G T C G A C T A G C T A C T G T C A G T A G C G C T A T G C A G T A C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T