p-value: | 1e-13 |
log p-value: | -3.105e+01 |
Information Content per bp: | 1.824 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 21.3 +/- 10.4bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | WARCCYGGSKGSCRGC-- ----CTGGCAGNCTGCCA |
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TFAP2C(var.3)/MA0815.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | WARCCYGGSKGSCRGC -TGCCCTGAGGGCA-- |
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TFAP2A(var.3)/MA0872.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | WARCCYGGSKGSCRGC -TGCCCNNAGGGCA-- |
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TFAP2B(var.3)/MA0813.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | WARCCYGGSKGSCRGC -TGCCCTGAGGGCA-- |
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NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | WARCCYGGSKGSCRGC--- ---CTTGGCANNNTGCCAA |
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Znf423/MA0116.1/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --WARCCYGGSKGSCRGC GCACCCCTGGGTGCC--- |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | WARCCYGGSKGSCRGC -TGCCCNGGGGCA--- |
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PB0102.1_Zic2_1/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --WARCCYGGSKGSCRGC ACCCCCCCGGGGGGN--- |
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PB0103.1_Zic3_1/Jaspar
Match Rank: | 9 |
Score: | 0.47 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --WARCCYGGSKGSCRGC NCCCCCCCGGGGGGN--- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | WARCCYGGSKGSCRGC- -------VBTGWCAGCB |
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