Information for 4-GGTGGCRCTGTGR (Motif 4)

A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A G T C C G T A A C T G A G C T C T A G A T G C A G T C C G T A A G T C A G T C
p-value:1e-15
log p-value:-3.633e+01
Information Content per bp:1.921
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 32.6bp
Average Position of motif in Background45.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GGTGGCRCTGTGR
------GCTGTG-
 A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCRCTGTGR
GGTTGGCAT-----
 A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTGGCRCTGTGR--
GGNGCGNCTGTTNNN
 A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCRCTGTGR
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-9
Orientation:reverse strand
Alignment:---------GGTGGCRCTGTGR
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGCRCTGTGR-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGTGGCRCTGTGR---
------GCTGTGGTTT
 A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGCRCTGTGR-
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GGTGGCRCTGTGR
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTGGCRCTGTGR---
-----GTCTGTGGTTT
 A C T G A C T G A C G T A C T G A T C G A G T C C T G A A G T C A C G T A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T