Information for 9-CAGGCTTGATTAT (Motif 8)

A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
Reverse Opposite:
G T C A G A C T G C T A T G C A C A G T A T G C C G T A G T C A A C T G G A T C A T G C A C G T T C A G
p-value:1e-15
log p-value:-3.527e+01
Information Content per bp:1.680
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.5 +/- 24.1bp
Average Position of motif in Background46.6 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGGCTTGATTAT
-AAGCTTG-----
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGCTTGATTAT
TTCACGCATGAGTT-
 A C G T A C G T A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGGCTTGATTAT
-----TTGATTGN
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGGCTTGATTAT
-----TTGTTTAC
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGGCTTGATTAT----
NNNNGTTGATTGGGTCG
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGGCTTGATTAT-
----ATTGATTYND
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGCTTGATTAT--
-NTTATTGATTTTTT
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGGCTTGATTAT-
---TATTGTTTATT
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T A C G T
A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGCTTGATTAT
--TAATTGATTA-
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGGCTTGATTAT
TTTGATTGATGN-
 A G T C C G T A A T C G C T A G T G A C A C G T A C G T A T C G G T C A A C G T C A G T C T G A A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T