Information for 22-GCMCTCYAGAGAG (Motif 33)

C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G
Reverse Opposite:
G T A C G A C T A G T C C G A T T A G C A C G T T C G A A C T G C G T A A T C G A C G T A T C G G A T C
p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.644
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets44.0 +/- 25.0bp
Average Position of motif in Background39.9 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCMCTCYAGAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCMCTCYAGAGAG-
GGNTCTCGCGAGAAC
 A C G T C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCMCTCYAGAGAG
ATTCTCGCGAGA-
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG----
--NNNACCGAGAGTNNN
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCMCTCYAGAGAG--
-----BTBRAGTGSN
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG---
-----CTTGAGTGGCT
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG--
-----CTYRAGTGSY
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG---
------TTGAGTGSTT
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG
-----CCAGACAG
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCMCTCYAGAGAG----
--GNNACCGAGAATNNN
 C T A G T A G C T G C A T A G C G C A T G T A C A G C T G T C A A T C G C G T A C T A G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T