Information for 18-ATGTTTTGCA (Motif 26)

G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A
Reverse Opposite:
C G A T A C T G A T G C C G T A C G T A C G T A G T C A A G T C G T C A A C G T
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.843
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets45.4 +/- 22.2bp
Average Position of motif in Background45.7 +/- 41.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----ATGTTTTGCA
NNGTANTGTTTTNC-
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTTTGCA---
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATGTTTTGCA----
ANATTTTTGCAANTN
 A C G T G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATGTTTTGCA
---TTTTCCA
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGTTTTGCA--
--ATTTTCCATT
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGTTTTGCA--
-NATTGTGCAAT
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTTTGCA--
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A C G T G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGTTTTGCA---
TTCATTTGCATAT
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGTTTTGCA--
--ATTTTCCATT
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATGTTTTGCA---
---ATTTGCATAA
 G T C A A C G T C T A G A C G T A C G T C G A T C G A T A T C G T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A