Information for 17-TGCATAGGTC (Motif 25)

A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C
Reverse Opposite:
C T A G C T G A A G T C A G T C A C G T G C T A A C G T A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.8 +/- 24.6bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGCATAGGTC--
--CAAAGGTCAG
 A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCATAGGTC-----
--CAAAGGTCAAGGG
 A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCATAGGTC-
ANGNAAAGGTCA
 A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGGTC-----
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGGTC-----
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCATAGGTC-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGCATAGGTC-
-----AGGTCA
 A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCATAGGTC-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCATAGGTC
ATGMATATDC-
 A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCATAGGTC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A C A G T T C G A A C T G A C T G A G C T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A