Information for 14-ATTGCCTTTGTTT (Motif 21)

C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T
p-value:1e-6
log p-value:-1.494e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 24.4bp
Average Position of motif in Background66.8 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT-
----CCTTTGTTTT
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT
----CCTTTGTT-
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATTGCCTTTGTTT----
NNNTCCTTTGTTCTNNN
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTGCCTTTGTTT----
TNNTCCTTTGTTCTNNT
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT
----CCWTTGTY-
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT-
----YCTTTGTTCC
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ATTGCCTTTGTTT
---NCCATTGTTY
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT-
----CCATTGTTTT
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ATTGCCTTTGTTT-
----CCWTTGTYYB
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATTGCCTTTGTTT
---NCCATTGTTC
 C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C