Information for 7-GCAAGCCCAA (Motif 11)

C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
Reverse Opposite:
A C G T C G A T C A T G A C T G A C T G T G A C A C G T C G A T T C A G A G T C
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.826
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif108.7
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets57.3 +/- 21.7bp
Average Position of motif in Background51.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAAGCCCAA-
-CAAGGHCANV
 C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAAGCCCAA
AGATGCAATCCC--
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAAGCCCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCCCAA
NTCAAGGTCA-
 A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCCCAA
BTCAAGGTCA-
 A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCCCAA----
GGGTGTGCCCAAAAGG
 A C G T A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCCCAA
GGAAANCCCC-
 A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAAGCCCAA
-TAATCCCN-
 C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAAGCCCAA
AGCGCGCC---
 A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCAAGCCCAA-
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A C G T A A C T G T G A C A G T C G T A C C G T A T G C A A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C