Information for 1-GGCCACCAGGTGGCRV (Motif 1)

C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
Reverse Opposite:
A T C G A G T C C A T G A T G C A G T C G T C A A G T C A G T C C G A T C T A G T A C G A G C T A C T G A T C G G A T C G T A C
p-value:1e-45
log p-value:-1.037e+02
Information Content per bp:1.637
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif172.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.7 +/- 25.4bp
Average Position of motif in Background49.6 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV-----
-GCCASCAGGGGGCGCYVNNG
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GGCCACCAGGTGGCRV--
TGGCCACCAGGGGGCGCTA
 A C G T C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACCAGGTGGCRV---
TGGCCACCAGGTGGCACTNT
 A C G T C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
----AACAGATGGC--
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
DCHCAGCAGGRGGCC-
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
NCNCAGCGGGGGGTC-
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
-CCCCCCCGGGGGNN-
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
NCCCCCCCGGGGGGN-
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCCACCAGGTGGCRV
-CACAGCAGGGGG---
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGCCACCAGGTGGCRV
----AACAGGTGNT--
 C A T G C T A G T A G C A G T C C T G A A T G C G A T C C G T A A C T G C T A G C A G T A C T G A T C G G T A C T C A G T A C G
A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T