Information for 19-AKWWMACYCTGMC (Motif 21)

C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G C T A G A C T G A C G T A C T G C G T A C G T A G T A C C G A T
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.808
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 27.0bp
Average Position of motif in Background67.3 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AKWWMACYCTGMC-
NAGGTCACNNTGACC
 A C G T C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AKWWMACYCTGMC--
AGGTCACCCTGACCT
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AKWWMACYCTGMC---
CAGGTCACCGTGACCTT
 A C G T C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AKWWMACYCTGMC-
--CGCCCCCTGACA
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T
A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AKWWMACYCTGMC----
--TGACCTCTGACCCCN
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AKWWMACYCTGMC--
---TGACCTTGACCT
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AKWWMACYCTGMC---
------VGCTGWCAVB
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:8
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------AKWWMACYCTGMC
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

PPARG/MA0066.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AKWWMACYCTGMC-----
GTAGGTCACGGTGACCTACT
 A C G T A C G T C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AKWWMACYCTGMC
-------GCTGTG
 C G T A A C T G G C A T C G A T G T A C G T C A A G T C A G T C A G T C A C G T A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G