Information for 6-KAWATKCAAWRCWAWT (Motif 6)

A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
Reverse Opposite:
C G T A C G A T A C G T C G T A C T A G A G T C C G A T A C G T A C G T C T A G T G C A C G T A C G A T G C T A A C G T G T A C
p-value:1e-13
log p-value:-3.134e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 21.6bp
Average Position of motif in Background70.5 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:KAWATKCAAWRCWAWT
-ATATGCAAAT-----
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KAWATKCAAWRCWAWT
-ATATGCAAATNNN--
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:KAWATKCAAWRCWAWT
-TTATGCAAAT-----
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KAWATKCAAWRCWAWT
AATCAATTCAATAATT--
 A C G T A C G T A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KAWATKCAAWRCWAWT
--NATTCAAAT-----
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:KAWATKCAAWRCWAWT
-AGATGCAATCCC---
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KAWATKCAAWRCWAWT
--TATGCAAAT-----
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KAWATKCAAWRCWAWT
TTGTATGCAAATTAGA-
 A C G T A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KAWATKCAAWRCWAWT
GHATATKCAT-------
 A C G T A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:KAWATKCAAWRCWAWT---
-------WATGCAAATGAG
 A C T G C G T A C G A T C G T A A C G T A C G T A G T C G T C A C G T A C G T A C T A G G A T C C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G