p-value: | 1e-7 |
log p-value: | -1.651e+01 |
Information Content per bp: | 1.809 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.53% |
Number of Background Sequences with motif | 280.7 |
Percentage of Background Sequences with motif | 0.58% |
Average Position of motif in Targets | 49.2 +/- 26.8bp |
Average Position of motif in Background | 50.5 +/- 28.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3/MA0514.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | ACTTAGTTTT CCTTTGTTTT |
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PH0094.1_Lhx4/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------ACTTAGTTTT- TAAACTAATTAGCTTTG |
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PH0108.1_Msx3/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----ACTTAGTTTT- NNNTTAATTGGTTTTN |
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PH0092.1_Lhx2/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ACTTAGTTTT NNNNNCTAATTAGTTTA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACTTAGTTTT- -TTAAGTGCTT |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --ACTTAGTTTT----- ANNTCTATTGTTCNNNA |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACTTAGTTTT- TTGACCTANTTATN |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACTTAGTTTT----- NNTTTATTGTTCTNNN |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACTTAGTTTT----- AANTTATTGTTCTNNA |
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FOXP1/MA0481.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACTTAGTTTT------ -CTTTGTTTACTTTTN |
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