Information for 4-GGTCAGGATGTAG (Motif 10)

A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C T G A G T A C C G T A A C G T A G T C A G T C A C G T A C T G C G T A A G T C A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 16.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGATGTAG
AGGTCA--------
 A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGTCAGGATGTAG-
--ACAGGATGTGGT
 A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTCAGGATGTAG
-ANCAGGATGT--
 A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGGATGTAG
AGRGGTCA--------
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGTCAGGATGTAG
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTCAGGATGTAG
-NDCAGGAARTNN
 A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGGATGTAG
TRAGGTCA--------
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGTCAGGATGTAG
ATCAAGGTCA--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGGATGTAG
CGCGCCGGGTCACGTA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGTCAGGATGTAG
-AACAGGAAGT--
 A C T G A C T G A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C T G A G C T C G T A A C T G
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T