Information for 3-ACCAGAAAAGGAC (Motif 3)

T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
Reverse Opposite:
C A T G G A C T G T A C G A T C G C A T G C A T A C G T A C G T A G T C A C G T A C T G A C T G A C G T
p-value:1e-22
log p-value:-5.246e+01
Information Content per bp:1.648
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.32%
Number of Background Sequences with motif112.5
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets55.0 +/- 22.6bp
Average Position of motif in Background47.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACCAGAAAAGGAC
-CCATATATGG--
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACCAGAAAAGGAC
-CCATATATGGNA
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACCAGAAAAGGAC
--CAGATAAGGN-
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACCAGAAAAGGAC
-ANAGATAAGAA-
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACCAGAAAAGGAC
TTCCATATATGGAA
 A C G T T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCAGAAAAGGAC
--NAGATAAGNN-
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

SRF/MA0083.3/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCAGAAAAGGAC-
TGACCATATATGGTCA
 A C G T A C G T T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCAGAAAAGGAC
AAGCCATAAAA----
 A C G T A C G T T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCAGAAAAGGAC
-NVAGATAAGR--
 T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACCAGAAAAGGAC
GNCTATAAAAGG--
 A C G T T G C A T G A C T G A C T G C A T A C G G T C A G T C A C G T A C G T A C T A G C A T G C T G A G T A C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T