Information for 15-AAMCRSTCAGKAA (Motif 19)

C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T G T A C A G T C A C G T A C T G C G T A A T C G A G C T A C T G A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.474e+01
Information Content per bp:1.868
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 28.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAMCRSTCAGKAA
AGCCACTCAAG--
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAMCRSTCAGKAA--
-----NACAGGAAAT
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AAMCRSTCAGKAA--
-----NACAGGAAAT
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AAMCRSTCAGKAA---
------ACAGGAAGTG
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAMCRSTCAGKAA---
-CTGAGTCAGCAATTT
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T A C G T
A C G T G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAMCRSTCAGKAA----
-----NDCAGGAARTNN
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAMCRSTCAGKAA
MRSCACTYAA---
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAMCRSTCAGKAA
AAGCACTTAA---
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAMCRSTCAGKAA
------AGAGGAA
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAMCRSTCAGKAA--
-----AACAGGAAGT
 C G T A C G T A G T C A T A G C C T G A A T G C A C G T A G T C C G T A A C T G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T