Information for 5-RATGASMTCATCH (Motif 3)

C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
Reverse Opposite:
C T A G T C A G T G C A C G A T C T A G G C T A A C G T T A C G A C G T G T A C C G T A A G C T A G T C
p-value:1e-27
log p-value:-6.415e+01
Information Content per bp:1.647
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.92%
Number of Background Sequences with motif500.5
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets54.5 +/- 26.2bp
Average Position of motif in Background53.6 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:forward strand
Alignment:RATGASMTCATCH
-ATGACGTCATCN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:RATGASMTCATCH--
NATGACATCATCNNN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RATGASMTCATCH
-ATGACGTCAYYN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RATGASMTCATCH-
-ATGACATCATCNN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:RATGASMTCATCH
-ATGACGTCATCN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:RATGASMTCATCH
-RTGACGTCAYCN
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:RATGASMTCATCH
--TGACGTCATC-
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C G T A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:RATGASMTCATCH
GATGACGTCATC-
 C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--RATGASMTCATCH-
NCGATGACGTCATCGN
 A C G T A C G T C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G

ATF7/MA0834.1/Jaspar

Match Rank:10
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-RATGASMTCATCH
CGATGACGTCATCG
 A C G T C T A G T C G A A C G T C A T G C G T A A T G C T G C A C G A T A G T C C G T A A C G T A G T C G A T C
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G