Information for 6-TAGGAGTTTCTAAAAG (Motif 18)

A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
Reverse Opposite:
G T A C A C G T A C G T A C G T C G A T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G A T C G T A
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.2 +/- 15.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG
TAGAANVTTCTAGAA-
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T

HSF2/MA0770.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG
--GAANGTTCTAGAA-
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG
--GAACGTTCTAGAA-
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGGAGTTTCTAAAAG
-GGGAATTTCC-----
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG
-GGGAATTTCC-----
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGTTTCTAAAAG-
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG
--GAANNTTCTAGAA-
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGTTTCTAAAAG
NNATTGGACTTTNGNN---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TAGGAGTTTCTAAAAG--
---NNNTTTNTAATACNG
 A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGTTTCTAAAAG
AAGATCGGAANTNNNA----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A C G T A A C T G
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A A C G T A C G T A C G T A C G T