Information for 11-CCTTTTTTGGCCT (Motif 14)

A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C A T G A G T C A G T C G T C A C T G A G T C A C G T A C G T A C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 23.8bp
Average Position of motif in Background42.1 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTTTTTTGGCCT
--TTTTATGGCTN
 A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTTTTGGCCT
CCATATATGGNA-
 A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTTTTGGCCT
CCATATATGG---
 A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTTTTTGGCCT
CCTTTTATAGNC-
 A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTTTGGCCT-
TGACCTTTCGTGACCTT
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTTTGGCCT--
NAATTTTATTACCNNN
 A C G T A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTTTGGCCT--
NAATTTTATTACCTNN
 A C G T A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTTTTTTGGCCT
-NTTTTATGAC--
 A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTTTTTTGGCCT
TTCCATATATGGAA-
 A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTTTGGCCT-
NGANTTTTATGGCTCN
 A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T G A C T A C G T A C T G A C T G G A T C A G T C A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T