Information for 10-CATCGAAATA (Motif 12)

A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A T G C A C T G C G T A C G A T A C T G
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.867
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif112.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets46.1 +/- 19.3bp
Average Position of motif in Background50.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATCGAAATA--
ATATGCAAATNNN
 A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CATCGAAATA
TTATGCAAAT-
 A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATCGAAATA
ATATGCAAAT-
 A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATCGAAATA
TATGCAAAT-
 A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CATCGAAATA
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATCGAAATA--
WATGCAAATGAG
 A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATCGAAATA---
CGTATCGAAACCAAA
 A C G T A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CATCGAAATA--
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATCGAAATA
NATGGAAAAN
 A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATCGAAATA
CCTTTGATGT-
 A C G T A G T C C G T A A C G T A G T C A T C G C G T A G T C A C G T A A C G T G T C A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T