Information for 9-CTAAGWTTAG (Motif 11)

A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A G T C A C G A T G T A C C G A T C A G T G T C A A T C G
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.777
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif67.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.8 +/- 22.9bp
Average Position of motif in Background45.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTAAGWTTAG-
GCTATAAATAGC
 A C G T A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAAGWTTAG-
ACTATAAATAGA
 A C G T A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTAAGWTTAG-
TCTAAAAATAGA
 A C G T A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTAAGWTTAG
CCAAAAATAG
 A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGWTTAG-
GCTAAAAATAGC
 A C G T A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTAAGWTTAG-
---GGATTAGC
 A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTAAGWTTAG-
---AGATAAGA
 A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAAGWTTAG
--RGGATTAR
 A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGWTTAG-
KCCAAAAATAGC
 A C G T A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAAGWTTAG-
-NVAGATAAGR
 A T G C A C G T G C T A C G T A C A T G C G T A A C G T G A C T C G T A A C T G A C G T
A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A