Information for 4-GTGGTCAGCGTCCACA (Motif 8)

A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
Reverse Opposite:
C A G T A T C G A C G T A C T G A T C G C G T A A G T C A T C G A G T C A C G T A T C G G T C A A G T C A G T C C G T A A G T C
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 24.4bp
Average Position of motif in Background73.7 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGGTCAGCGTCCACA
GGGGTCAAAGTCCAAT
 A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

NR2C2/MA0504.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGCGTCCACA
AGGGGTCAGAGGTCA--
 A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGGTCAGCGTCCACA
CANAGNNCAAAGTCCA--
 A C G T A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGGTCAGCGTCCACA
GARTGGTCATCGCCC---
 A C G T A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGTCAGCGTCCACA
GAGGTCAAAGGTCA--
 A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGCGTCCACA
AGRGGTCA---------
 A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGCGTCCACA
AGAGTCCAAAGTCCA--
 A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCAGCGTCCACA
TRAGGTCA---------
 A C G T A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GTGGTCAGCGTCCACA
---------ATCCAC-
 A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GTGGTCAGCGTCCACA-
-----CAACGTCCGCGG
 A C T G C G A T A C T G A C T G A C G T A T G C C G T A A C T G A T G C C T A G A C G T A T G C A G T C C G T A A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G