Information for 11-CCACAGGGGG (Motif 24)

G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
Reverse Opposite:
G T A C G A T C G T A C G T A C G A T C C A G T A C T G C G A T C T A G C A T G
p-value:1e-4
log p-value:-1.142e+01
Information Content per bp:1.681
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif9.82%
Number of Background Sequences with motif1890.4
Percentage of Background Sequences with motif3.94%
Average Position of motif in Targets48.3 +/- 27.1bp
Average Position of motif in Background50.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGGGG
GTCCCCAGGGGA
 A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCACAGGGGG--
CCCCCCCGGGGGNN
 A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG
AAACCACAGAN--
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGGGG
NWAACCACADNN--
 A C G T A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGG
AAACCACAGC---
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCACAGGGGG
-CACAGN---
 G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACAGGGGG----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T G T A C G A T C G C T A T G A C G T C A C T A G C A T G A C T G C T A G A C T G A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G