Information for 10-RGCGGCRATA (Motif 23)

C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
Reverse Opposite:
C G A T C G T A A C G T A G C T A T C G A G T C A G T C A C T G A G T C A G C T
p-value:1e-5
log p-value:-1.201e+01
Information Content per bp:1.814
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif19.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.7 +/- 27.8bp
Average Position of motif in Background54.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:RGCGGCRATA
GGCGGGAAAH
 C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--RGCGGCRATA
CWGGCGGGAA--
 A C G T A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---RGCGGCRATA
BTKGGCGGGAAA-
 A C G T A C G T A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-RGCGGCRATA-
TGGCGGGAAAHB
 A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-RGCGGCRATA
GGGCGGGAAGG
 A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:RGCGGCRATA
GGCGGGAARN
 C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RGCGGCRATA
GGGCGGGAAGG
 A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----RGCGGCRATA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----RGCGGCRATA
TTTTGGCGGGAAAA
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGCGGCRATA------
AAAGGTAATAAAATTT
 C T G A C T A G A G T C A C T G A C T G A T G C C T G A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T