Information for 16-CTGGTAACACGCT (Motif 19)

A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
Reverse Opposite:
C T G A A T C G G A T C A T C G C G A T A C T G C G A T A C G T C G T A G T A C A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 28.7bp
Average Position of motif in Background51.9 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTGGTAACACGCT
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGGTAACACGCT
SCCTAGCAACAG---
 A C G T A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGGTAACACGCT
GCTCGTAAAAA---
 A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTGGTAACACGCT
-------CACGCA
 A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGTAACACGCT
---TTMACACCTT
 A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTGGTAACACGCT
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGGTAACACGCT
SCTGTCARCACC--
 A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGGTAACACGCT
AAACCTCGTAAAATTT-
 A C G T A C G T A C G T A C G T A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGGTAACACGCT
ATGTAAACADGS-
 A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTGGTAACACGCT-
----TBGCACGCAA
 A G T C A C G T C T A G A C T G A C G T G T C A C G T A A G T C C G T A A T G C C T A G T A G C A G C T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A