Information for 1-ATGTCTTGAGTGTGGG (Motif 2)

C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G T C C G T A A G T C A C G T A G T C C G T A C G T A A C T G C G T A A G T C C G T A A C G T
p-value:1e-19
log p-value:-4.507e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif7.32%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 15.5bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG
------TGGGTGTGGC
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCTTGAGTGTGGG
NNTNTCATGAATGT---
 A C G T C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG-
NTTNTATGAATGTGNNC
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG
----CTTGAGTGGCT-
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATGTCTTGAGTGTGGG-
-----NTGGGTGTGGCC
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG-
------TGGGTGTGGCN
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG
----CTYRAGTGSY--
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATGTCTTGAGTGTGGG-----
-----NNGCGTGTGTGCNGCN
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGTCTTGAGTGTGGG
----BTBRAGTGSN--
 C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ATGTCTTGAGTGTGGG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T G T A C C G A T A C G T A C T G G T C A C T A G A C G T A C T G C G A T A C T G A C T G C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T