Information for 11-YCCWYCTSCMWCA (Motif 18)

A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A T G C C G T A A C T G C T A G C G A T A C T G A C T G C T G A
p-value:1e-4
log p-value:-1.027e+01
Information Content per bp:1.831
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif36.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets68.8 +/- 27.9bp
Average Position of motif in Background42.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:YCCWYCTSCMWCA-------
GCCTCCTCCMTCWGACTGKS
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-YCCWYCTSCMWCA
SNGCACCTGCHS--
 A C G T A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YCCWYCTSCMWCA-
--CCCCTCCCCCAC
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A A C G T
A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YCCWYCTSCMWCA
NNCACCTGNN---
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:YCCWYCTSCMWCA--
-----TTGCAACATN
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YCCWYCTSCMWCA
GCCATCTGTT---
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YCCWYCTSCMWCA
CGCACCTGCT---
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---YCCWYCTSCMWCA
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:YCCWYCTSCMWCA
AACACCTGCT---
 A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--YCCWYCTSCMWCA
GCCCCGCCCCC----
 A C G T A C G T A G C T A G T C A G T C C G T A A G T C A G T C A C G T A T C G A G T C G T A C C G A T A G T C C G T A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T