Information for 9-CACCATGAGCATT (Motif 7)

A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A C T G A G T C A G C T A G T C C G T A A C G T A C T G A C T G A C G T A T C G
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 23.0bp
Average Position of motif in Background44.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACCATGAGCATT-----
-NNNNTGAGCACTGTNNG
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Myc/MA0147.2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACCATGAGCATT
--CCATGTGCTT-
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACCATGAGCATT
-CTCATTTGCATW
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCATGAGCATT---
-ACCGTGACTAATTNN
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CACCATGAGCATT
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACCATGAGCATT
-BTVATTWGCATA
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACCATGAGCATT
GACAATGNN----
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACCATGAGCATT
----ATTTGCATA
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACCATGAGCATT---
-----TGTGGATTNNN
 A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-15
Orientation:reverse strand
Alignment:---------------CACCATGAGCATT
CACAAGGGARWARGRCACCATGAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T C A A G T C A G T C C G T A A C G T A C T G C T G A A C T G G T A C C G T A A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G A C G T A C G T A C G T