Information for 5-AMWGTTCCTACTTGTT (Motif 4)

C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C C G T A C G T A C A T G A C G T C G T A C T A G T A C G G T C A C G T A A G T C C G T A C A G T C G A T
p-value:1e-15
log p-value:-3.482e+01
Information Content per bp:1.739
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 20.5bp
Average Position of motif in Background38.0 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AMWGTTCCTACTTGTT----
NNTGTTCTTTTTTGTTTACT
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.66
Offset:10
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT
----------ATTGTT
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.65
Offset:8
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT------
--------TAATTGTTCTAAAC
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.64
Offset:10
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT-
----------ATTGTTA
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.63
Offset:10
Orientation:reverse strand
Alignment:AMWGTTCCTACTTGTT---
----------ATTGTTTAN
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AMWGTTCCTACTTGTT-----
----NNNTCCTTTGTTCTNNN
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AMWGTTCCTACTTGTT-----
----TNNTCCTTTGTTCTNNT
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.63
Offset:8
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT--
--------CCATTGTTNY
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT----
-----CTATAATTGTTAGCG
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AMWGTTCCTACTTGTT------
------TTCAATTGTTCTAAAA
 C G T A G T C A C G A T C T A G A C G T A C G T A T G C G A T C G A C T T G C A G T A C A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A