Information for 13-ATAKYTGCCC (Motif 40)

C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C
Reverse Opposite:
A C T G C T A G C T A G A G T C C G T A T C G A T G C A A C G T G T C A A C G T
p-value:1e-5
log p-value:-1.264e+01
Information Content per bp:1.792
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.7 +/- 14.1bp
Average Position of motif in Background43.7 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATAKYTGCCC---
----ATGCCCACC
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATAKYTGCCC---
----CTGCCCGCA
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATAKYTGCCC------
GGGTGTGCCCAAAAGG
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATAKYTGCCC-----
NTNTATGTGCACATNNN
 A C G T A C G T C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATAKYTGCCC-
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATAKYTGCCC
RTACGTGC--
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATAKYTGCCC-
NNACTTGCCTT
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATAKYTGCCC-----
-----TGCCCAGNHW
 C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATAKYTGCCC-----
NNGTATGTGCACATNNN
 A C G T A C G T C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATAKYTGCCC
GGGTACGTGC--
 A C G T A C G T C G T A A C G T C G T A A C G T A G C T A C G T A C T G A G T C G A T C A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T