Information for 18-CATTGCCCCAATC (Motif 30)

A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G C T A G A C T G A G T C C G T A G C T A A C G T A C T G
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 21.5bp
Average Position of motif in Background49.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATTGCCCCAATC--
AAATGGACCAATCAG
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CATTGCCCCAATC--------
---TGGACCAATCAGCACTCT
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CATTGCCCCAATC-------
---CGACCCAATCAACGGTG
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CATTGCCCCAATC
TGACCTTTGCCCCA---
 A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CATTGCCCCAATC--
-------CCAATCAA
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTGCCCCAATC-
GGGTGTGCCCAAAAGG
 A C G T A C G T A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CATTGCCCCAATC
NAGGTCANTGACCT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CATTGCCCCAATC
-ATTGCACAATA-
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CATTGCCCCAATC
--CTGCCCGCA--
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATTGCCCCAATC
-ATTGCGCAAC--
 A G T C C G T A C G A T A C G T A C T G A G T C A G T C A G T C G T A C C G T A G T C A A C G T A G T C
A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T